Differences

This shows you the differences between two versions of the page.

--- taxonomy:start [2023/05/15 10:05] – created 172.20.55.153
+++ taxonomy:start [2023/05/15 10:07] (current) – removed 172.20.55.153
@@ Line 1: / Line 1: @@
-====== Taxonomy ======
-  * Biovars
-    * BV1: the //Agrobacterium tumefaciens// species complex, divided into multiple genomnospecies (G?), some have Latin names:
-^Genomnospecies  ^Species Name  ^Representative Strains  ^Note  ^
-|G1  |//Agrobacterium fabacearum//  |CNPSo 675<sup>T</sup> (=UMR 1457<sup>T</sup>=LMG 31642<sup>T</sup>), Ach5, 1D1108  |[[https://lpsn.dsmz.de/species/agrobacterium-fabacearum|LPSN]]  |
-      * G2: //Agrobacterium pusense// (//Rhizobium pusense// in NCBI); CFBP 5875.
-      * G3: //Agrobacterium tomkonis//
-      * G4: //Agrobacterium radiobacter//; 1D1460
-      * G7: //Agrobacterium deltaense//; 1D1609
-      * G8: //Agrobacterium fabrum//; C58
-      * G9: //Agrobacterium salinitolerans//
-      * G14: //Agrobacterium nepotum//
-      * G15: //Agrobacterium viscosum//
-      * G19: //Agrobacterium burrii//; [[https://doi.org/10.1094/PHYTO-11-21-0463-SC]]
-      * G20: //Agrobacterium shirazense//; [[https://doi.org/10.1094/PHYTO-11-21-0463-SC]]
-      * //Agrobacterium arsenijevicii//; no genomnospecies assignment, sister of //Agrobacterium nepotum//; [[https://doi.org/10.1016/j.syapm.2015.06.001]]
-      * //Agrobacterium leguminum//; no genomnospecies assignment, sister of //Agrobacterium deltaense//; [[https://doi.org/10.1099/ijsem.0.005120]]
-    * BV1-like: sister group of BV1
-      * //Agrobacterium bohemicum//
-      * //Agrobacterium larrymoorei//
-      * //Agrobacterium rosae//
-      * //Agrobacterium rubi// = Genomnospecies 11 (G11)
-      * //Agrobacterium skierniewicense//
-      * //Agrobacterium vaccinii//
-    * BV2: Genomnospecies 10 (G10), current name = //Rhizobium rhizogenes//
-    * BV3: previously //Agrobacterium vitis//, now //Allorhizobium// spp. Narrow host range, limited to grapevine.
-  * Genus names
-    * //Agrobacterium//: 1 circular chromosome (~2.9 Mb) +  1 linear chromid (~2.2 Mb); BV1 & BV1-like. The linear chromid is a specific trait.
-    * //Allorhizobium//: 1 circular chromosome (~3.7 Mb) +  1 circular chromid (~1.3 Mb); BV3
-    * //Rhizobium//: 1 circular chromosome (~3.8-4.8 Mb) +  1 or more circular chromids; BV2, BV2-like, diverse rhizobia